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Input/Output

  • Generate Report: You can create an attractively formatted report for the assays you designed using AlleleID®. It should be helpful in record keeping and for sharing information with colleagues. The report helps visualize the positions of the primers and probes on the sequence, includes a list of the alternate primers and probes, displays primers, probe, amplicon and sequence properties and the design parameters used.

  • Sequence details view: Comprehensive information of all sequences in a project is available locally using the built-in database and the sequence details can be viewed using your browser from within the program.

  • Sequence Visualization: AlleleID® graphically displays the primers and probes on the sequence.

  • Input formats: Supports sequences in standard GenBank and FASTA format. Using the multiple retrieval facility, sequences can be loaded from local drives.

  • SNP loading: Easily loads thousands of SNPs from the variation descriptors in standard GenBank variation files.

  • View output in spreadsheet: Results can be viewed and manipulated in any spreadsheet like MS Excel, Lotus 123 or StarOffice spreadsheet.

 
AlleleID® Features AlleleID® Highlights AlleleID® Applications
-Real Time PCR Primer Design

-SYBR® Green Primer Design

-TaqMan® Probe Design

-Molecular Beacon Design

-FRET probe design

-Microarray Probe Design


-Database Support

-Input & Output Formats

-Cross Species/ Taxa Specific Assays

-Species Identification Assays

-Microarray Based Gene Splicing Detection

-Exon Junction Primer Design

-MLPA® Probe Design

-Luminex xMAP® Assays
-Pathogen Detection

-Bacterial Identification

-Gene Splicing

-Environment Monitoring

-Biodiversity Studies

-Biodefense Studies

 
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