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A comprehensive high throughput informatics tool for characterizing lipids using precursors and product ions data from MS and MS/MS data
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SimLipid®

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Rajanayake, K. K., Taylor, W. R., & Isailovic, D. (2016). The comparison of glycosphingolipids isolated from an epithelial ovarian cancer cell line and a nontumorigenic epithelial ovarian cell line using MALDI-MS and MALDI-MS/MS. Carbohydrate Research. In Press, doi:10.1016/j.carres.2016.05.006 View Research Article/Paper
Han, Xianlin. Lipidomics: Comprehensive Mass Spectrometry of Lipids. John Wiley & Sons, 2016 View Research Article/Paper
Cordeiro, F. B., Cataldi, T. R., da Costa, L. D. V. T., de Lima, C. B., Stevanato, J., Zylbersztejn, D. S., Ferreira, C.R., Eberlin, M.N., Cedenho, A.P., & Turco, E. G. L. (2014). Follicular fluid lipid fingerprinting from women with PCOS and hyper response during IVF treatment. Journal of assisted reproduction and genetics. doi:10.1007/s10815-014-0375-0. View Research Article/Paper
Gueugneau, M., Coudy-Gandilhon, C., Théron, L., Meunier, B., Barboiron, C., Combaret, L., Taillandier, D., Polge, C., Attaix, D., Picard, B., Verney, J., Roche, F., Féasson, L., Barthélémy, J.C., & Béchet, D. (2014). Skeletal Muscle Lipid Content and Oxidative Activity in Relation to Muscle Fiber Type in Aging and Metabolic Syndrome. J Gerontol A Biol Sci Med Sci, glu086. doi: 10.1093/gerona/glu086. View Research Article/Paper
Kang, Y. P., Lee, W. J., Hong, J. Y., Lee, S. B., Park, J. H., Kim, D., Park, S., Park, C.S., Park, S.W., & Kwon, S. W. (2014). Novel approach for analysis of Bronchoalveolar Lavage Fluid (BALF) using HPLC-QTOF-MS-based lipidomics: Lipid levels in asthmatics and corticosteroid-treated asthmatic patients. J. Proteome Res, 13 (9), 3919–3929. View Research Article/Paper
Glutathion, D. T. (2014). Deutscher Lebensmittelchemikertag 2013 in Braunschweig. Lebensmittelchemie, 68, 17-48. View Research Article/Paper
Edwards, G., Aribindi, K., Guerra, Y., Lee, R. K., & Bhattacharya, S. K. (2014). Phospholipid profiles of control and glaucomatous human aqueous humor. Biochimie, 101, 232-247. View Research Article/Paper
Nie, W., Yan, L., Lee, Y. H., Guha, C., Kurland, I. J., & Lu, H. (2014). Advanced mass spectrometry‐based multi‐omics technologies for exploring the pathogenesis of hepatocellular carcinoma. Mass Spectrometry Reviews. doi: 10.1002/mas.21439. View Research Article/Paper
West, R. E., Marvin, R. K., Hensley, K., & Isailovic, D. (2014). Qualitative analysis of omega-3 fatty acid oxidation by desorption electrospray ionization-mass spectrometry (DESI-MS). Int J Mass Spectrom, 372, 29-38. View Research Article/Paper
Camargo, M., Intasqui, P., de Lima, C. B., Montani, D. A., Nichi, M., Pilau, E. J., Gozzo, F.C., Lo Turco, E.G., & Bertolla, R. P. (2014). MALDI-TOF fingerprinting of seminal plasma lipids in the study of human male infertility. Lipids, 49(9), 943-956. View Research Article/Paper
Kaur, P., Rizk, N., Ibrahim, S., Luo, Y., Younes, N., Perry, B., Dennis, K., Zirie, M., Luta, G., & Cheema, A.K. (2014). Quantitative metabolomic and lipidomic profiling reveals aberrant amino acid metabolism in type 2 diabetes. Mol Biosyst., 9(2):307-17. View Research Article/Paper
Aribindi, K., Guerra, Y., Lee, R. K., & Bhattacharya S. K. (2013). Comparative phospholipid profiles of control and glaucomatous human trabecular meshwork. Invest Ophthalmol Vis Sci, 54(4):3037-3044. View Research Article/Paper
Ghosh, S.P., Singh, R., Chakraborty, K., Kulkarni, S., Uppal, A., Luo, Y., Kaur, P., Pathak, R., Kumar, K.S., Hauer-Jensen, M., & Cheema, A.K. (2013). Metabolomic changes in gastrointestinal tissues after whole body radiation in a murine model. Mol Biosyst, 9(4):723-731. View Research Article/Paper
Bhattacharya, S.K. (2013). Recent advances in shotgun lipidomics and their implication for vision research and ophthalmology. Curr Eye Res, 38(4):417-427. View Research Article/Paper
Aribindi, K., Guerra, Y., Piqueras, M. D. C., Banta, J. T., Lee, R. K., & Bhattacharya, S. K. (2013). Cholesterol and glycosphingolipids of human trabecular meshwork and aqueous humor: comparative profiles from control and glaucomatous donors. Current eye research, 38(10), 1017-1026.
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Wheelock, C.E., Goss, V.M., Balgoma, D., Nicholas, B., Brandsma, J., Skipp, P.J., Snowden, S., Burg, D., D'Amico, A., Horvath, I., Chaiboonchoe, A., Ahmed, H., Ballereau, S., Rossios, C., Chung, K.F., Montuschi, P., Fowler, S.J., Adcock, I.M., Postle, A.D., Dahlén, S.E., Rowe, A., Sterk, P.J., Auffray, C., Djukanovic, R., & U-BIOPRED Study Group. (2013). Application of 'omics technologies to biomarker discovery in inflammatory lung diseases. Eur Respir J, 42(3):802-825. View Research Article/Paper
Chughtaia, S., Chughtaia, K., Cillero-Pastora, B., Kiss, A., Agrawal, P., MacAleesea, L., & Heeren, R.M.A. (2012). A multimodal mass spectrometry imaging approach for the study of musculoskeletal tissues. Int J Mass Spectrom, 325–327, 150–160.
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Chansela, P., Goto-Inoue, N., Zaima, N., Hayasaka, T., & Sroyraya, M. et al. (2012) Composition and localization of lipids in Penaeus merguiensis ovaries during the ovarian maturation cycle as revealed by imaging mass spectrometry. PLoS ONE, 7(3): e33154. View Research Article/Paper
Scherer, M., Leuthäuser-Jaschinski, K., Ecker, J., Schmitz, G., & Liebisch, G. (2010). A rapid and quantitative LC-MS/MS method to profile sphingolipids. J Lipid Res, 51(7):2001-2011. View Research Article/Paper
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