Statistical Validation
With built in support for decoy database searches, PROTEOIQ enables calculation of false discovery rates. Further validate your proteome using peptide or protein probabilities. |

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Proteome Visualization
Tour the variety of custom results views available in PROTEOIQ. Navigating between peptide and protein views is simple or link out to public databases for more information. |

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Comparative Proteomics
Other software tools may claim to do comparative proteomics but they all fall short. See how PROTEOIQ reveals the differences and similarities between your proteomes; getting you to the biology faster than ever before. |

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Label Free Quantification - Spectral Counting
Welcome to the only software that supports quantification by spectral counts. This demonstration walks you through PROTEOIQ’s normalization functions, error estimations and relative expression analysis system. |

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Label Free Quantification - Precursor Intensity (AUC)
ProteoIQ’s label free quantitation using area under the curve (LF-AUC) provides accurate and robust quantitation using intensities derived from extracted ion chromatograms for every precursor detected in your MS or MS/MS instrument files. |

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Isobaric Tag Quantitation - iTRAQ, TMT, and Custom Reagents
Learn how ProteoIQ empowers isobaric label based quantitation. Regardless of the labeling strategy you employ ProteoIQ provides a feature rich software platform giving you ultimate control over all aspects of quantitation. |

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Biological Annotation
ProteoIQ provides a completely customizable interface to support any form of biological annotation including protein localization, function or pathway. |

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