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Beacon Designer

 

Input/Output

  • Generate Report: You can create an attractively formatted report for the assays you designed. It should be helpful in record keeping and for sharing information with colleagues. The report helps visualize the positions of the primers and probes on the sequence, includes a list of the alternate primers and probes, displays primers, probe, amplicon and sequence properties and the design parameters used.

  • Sequence details view: Comprehensive information of all sequences in a project is available locally using the built-in database and the sequence details can be viewed using your browser from within the program.

  • Sequence Visualization: The primers and probes designed are displayed graphically in the Sequence View pane along with the regions of cross-homology and potential template structures.

  • Input formats: Supports sequences in standard GenBank and FASTA format. Using the multiple retrieval facility, sequences can be loaded from local drives.

  • SNP loading: Easily loads thousands of SNPs from the variation descriptors in standard GenBank variation files.

  • View output in spreadsheet: Results can be viewed and manipulated in any spreadsheet like MS Excel, Lotus 123 or StarOffice spreadsheet.
Beacon Designer Features
Beacon Designer Highlights
Beacon Designer Applications
-Real Time PCR Primer Design

-SYBR® Green Primer Design

-TaqMan® Probe Design

-Molecular Beacon Design

-FRET Probe Design

-Database Support

-Input & Output Formats

-MethyLight Assays

-Scorpions® Assays

-LNA Substituted TaqMan® Assays

-NASBA Assays

-Multiplex Real Time PCR

-Real Time PCR

-DNA Methylation


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SYBR® is a registered trademark of Molecular Probes, Inc. | TaqMan® is a registered trademark of Roche Molecular Systems, Inc. | LNA and Locked Nucleic Acid are trademarks of Exiqon | NASBA is a registered Trademark of bioMerieux.

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