Citations and Reviews

Animal Viruses Probe Dataset (AVPDS) for Microarray-Based Diagnosis and Identification of Viruses

Brijesh S. Yadav, Mayank Pokhriyal, Dinesh P. Vasishtha, Bhaskar Sharma
Current Microbiology
March 2014, Volume 68, Issue 3, pp 301-304
http://link.springer.com/article/10.1007/s00284-013-0477-4#page-1

Microarray Chip Based Identification of a Mixed Infection of Bovine Herpesvirus 1 and Bovine Viral Diarrhea 2 From Indian Cattle

Barkha Ratta, Brijesh Singh Yadav, Mayank Pokhriyal, Meeta Saxena, Bhaskar Sharma
Current Microbiology, January 2014, Volume 68, Issue 1, pp 127-131
http://link.springer.com/article/10.1007/s00284-013-0448-9#page-1

Membrane-Based Oligonucleotide Array Developed from Multiple Markers for the Detection of Many Phytophthora Species

Wen Chen, Zeinab Robleh Djama, Michael D. Coffey, Frank N. Martin, Guillaume J. Bilodeau,
Lorien Radmer, Geoff Denton, and C. André Lévesque
Phytopathology, Vol. 103, No. 1, 2013
http://apsjournals.apsnet.org/doi/pdfplus/10.1094/PHYTO-04-12-0092-R

Genetic Types, Gene Repertoire, and Evolution of Isolates of the Salmonella enterica Serovar 4,5,12:i:− Spanish Clone Assigned to Different Phage Types

Patricia Garcíab, Burkhard Malornyb, Elisabeth Hauserb,c, M. Carmen Mendozaa and M. Rosario Rodicioa
10.1128/JCM.02777-12
http://jcm.asm.org/content/51/3/973.full

LSD 2.0: an update of the leaf senescence database

Zhonghai Li,Yi Zhao, Xiaochuan Liu, Jinying Peng, Hongwei Guo and Jingchu Luo
Nucl. Acids Res. (1 January 2014) 42 (D1): D1200-D1205.
http://nar.oxfordjournals.org/content/42/D1/D1200.full

Microarray Analysis of Microbiota of Gingival Lesions in Noma Patients

Antoine Huyghe, Patrice François, Andrea Mombelli, Manuela Tangomo, Myriam Girard, Denise Baratti-Mayer, Ignacio Bolivar, Didier Pittet, Jacques Schrenze
PLoS Negl Trop Dis, 10.1371/journal.pntd.0002453
http://www.plosntds.org/article/info%3Adoi%2F10.1371%2Fjournal.
pntd.0002453#pntd-0002453-g004

Demonstration of a Melanoma-Specific CD44 Alternative Splicing Pattern That Remains Qualitatively Stable, but Shows Quantitative Changes during Tumour Progression

Raso-Barnett L, Banky B, Barbai T, Becsagh P, Timar J, et al.
PLoS ONE 8(1): e53883. doi:10.1371/journal.pone.0053883
http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.
pone.0053883

Identification of Multipath Genes Differentially Expressed in Pathway-Targeted Microarrays in Zebrafish Infected and Surviving Spring Viremia Carp Virus (SVCV) Suggest Preventive Drug Candidates

Encinas P, Garcia-Valtanen P, Chinchilla B, Gomez-Casado E, Estepa A, et al.
PLoS ONE 8(9): e73553. doi:10.1371/journal.pone.0073553
http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.
pone.0073553#pone-0073553-g006

Utilisation of Mucin Glycans by the Human Gut Symbiont Ruminococcus gnavus Is Strain-Dependent

Crost EH, Tailford LE, Le Gall G, Fons M, Henrissat B, et al.
PLoS ONE 8(10): e76341. doi:10.1371/journal.pone.0076341
http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.
pone.0076341#pone-0076341-g007

A high density COX1 barcode oligonucleotide array for identification and detection of species of Penicillium subgenus Penicillium.

W. CHEN, K.A. SEIFERT, C.A. LÉVESQUE
Molecular Ecology Resources, 21 Apr 2009, Volume 9, Issue s1, Pages 114-129
http://www3.interscience.wiley.com/cgi-bin/fulltext/122342785/HTMLSTART

Efficient algorithms for the discovery of DNA oligonucleotide barcodes from sequence databases.

M. ZAHARIEV, V. DAHL, W. CHEN, C. A. LÉVESQUE
Molecular Ecology Resources, 21 Apr 2009, Volume 9, Issue s1, Pages 58-64
http://www3.interscience.wiley.com/cgi-bin/fulltext/122342788/HTMLSTART

Oligonucleotide microarray with RD-PCR labeling technique for detection and typing of human papillomavirus.

Min W, Wen-Li M, Bao Z, Ling L, Zhao-Hui S, Wen-Ling Z.
Curr Microbiol. 2006 Mar;52(3):204-9. Epub 2006 Feb 14
http://www.ncbi.nlm.nih.gov/pubmed/16479359?dopt=Abstract

Infectious pathogen detection arrays: viral detection in cell lines and postmortem brain tissue.

Concepcion Conejero-Goldberg, Ena Wang, Chuli Yi, Terry E. Goldberg, Lorraine Jones-
Brando, Francesco M. Marincola, Maree J. Webster, E. Fuller Torrey. http://www.biotechniques.com/default.asp?
page=aop&subsection=article_display&display=full&id=112016

OligoDesign: optimal design of LNA (locked nucleic acid) oligonucleotide capture probes for gene expression profiling.

Niels Tolstrup,* Peter S. Nielsen, Jens G. Kolberg, Annett M. Frankel, Henrik Vissing, Sakari Kauppinen.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC168986/ http://nar.oupjournals.org/cgi/content/full/31/13/3758

Bioinformatics tools and guideline for PCR primer design.

Marianna Szemesa, D. Schoenb. http://www.academicjournals.org/AJB

Whole-Genome DNA Microarray Analysis of a Hyperthermophile and an Archaeon: Pyrococcus furiosus Grown on Carbohydrates or Peptides.

Gerrit J. Schut, Scott D. Brehm, Susmita Datta, Michael W. Adams http://jb.asm.org/cgi/content/full/185/13/3935

DNA Microarray - A technology that is reshaping molecular biology

M. Weghorst, Carol L.K. Sabourin
http://www.ufscc.ufl.edu/~escott/lab/genechip.htm

PREMIER Biosoft International's Array Designer facilitates primer and probe design for custom arrays.

Sarah Goforth Review